Difference between revisions of "TSS:Mm 99764.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HUMP68= | |HUMP68= | ||
|Hlr1= | |Hlr1= | ||
| − | |all_trans=AK084665:-56 | + | |all_trans=AK084665:-56 AK089185:-76 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=-56 | |distance=-56 | ||
| − | |distance_to_tss= | + | |distance_to_tss=185 |
|end=106788731 | |end=106788731 | ||
|end_of_center_position=106788723 | |end_of_center_position=106788723 | ||
|entrez_id=13207 | |entrez_id=13207 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=2600009A06Rik | + | |gene_alias=2600009A06Rik{{!}}G17P1{{!}}HUMP68{{!}}Hlr1{{!}}p68 |
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | ||
|gene_id=320162 | |gene_id=320162 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:2443502 | |hgnc_mgi_id=MGI:2443502 | ||
|nearest_ensembl=ENSMUSG00000020719 | |nearest_ensembl=ENSMUSG00000020719 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355676 |
|nearest_refseq=NM_007840 | |nearest_refseq=NM_007840 | ||
|nearest_unigene=Mm.491096 | |nearest_unigene=Mm.491096 | ||
| − | |num_trans= | + | |num_trans=2 |
|p68= | |p68= | ||
|species=mouse | |species=mouse | ||
Revision as of 03:58, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106788722 |
|---|---|
| End of the center position in the TSS region: | 106788723 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK084665 |
|---|---|
| Distance: | -56 |
| Num_trans: | 2 |
| All_trans: | AK084665:-56 AK089185:-76 |
TATA-Box annotation
| Distance to TSS: | 185 |
|---|---|
| Nearest PromoterID: | NM_001355676 |
| Entrez ID: | 13207 |
| Nearest Unigene: | Mm.491096 |
| Nearest Refseq: | NM_007840 |
| Nearest Ensembl: | ENSMUSG00000020719 |
| Gene Name: | centrosomal protein 95 |
| Gene Alias: | 2600009A06Rik|G17P1|HUMP68|Hlr1|p68 |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
