Difference between revisions of "TSS:Mm 99765.1"
From referenceTSS
| Line 5: | Line 5: | ||
|D330027A14Rik= | |D330027A14Rik= | ||
|F630025I20Rik= | |F630025I20Rik= | ||
| − | |all_trans=ENSMUST00000103068.9:0 ENSMUST00000018516.10:0 ENSMUST00000130019.1:0 NM_001166685:0 NM_177088 | + | |all_trans=ENSMUST00000103068.9:0 ENSMUST00000018516.10:0 ENSMUST00000130019.1:0 NM_001166685:0 NM_177088:0 AK076400:0 AK165351:0 BC116308:0 BC116309:0 BC090675:0 AK052705:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 14: | Line 14: | ||
|entrez_id=320162 | |entrez_id=320162 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=4732496G21Rik | + | |gene_alias=4732496G21Rik{{!}}AI118346{{!}}AI448335{{!}}Ccdc45{{!}}D330027A14Rik{{!}}F630025I20Rik |
|gene_description=centrosomal protein 95 | |gene_description=centrosomal protein 95 | ||
|gene_id=320162 | |gene_id=320162 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_177088 | |nearest_refseq=NM_177088 | ||
|nearest_unigene=Mm.30524 | |nearest_unigene=Mm.30524 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=106789235 | |start=106789235 | ||
|start_of_center_position=106789285 | |start_of_center_position=106789285 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000103068.9 ENSMUST00000018516.10 ENSMUST00000130019.1 NM_001166685 NM_177088 | + | |transcript_name=ENSMUST00000103068.9 ENSMUST00000018516.10 ENSMUST00000130019.1 NM_001166685 NM_177088 AK076400 AK165351 BC116308 BC116309 BC090675 AK052705 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99765.1 | |tss_id=mm_99765.1 | ||
Revision as of 03:58, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 106789285 |
|---|---|
| End of the center position in the TSS region: | 106789286 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000103068.9 ENSMUST00000018516.10 ENSMUST00000130019.1 NM_001166685 NM_177088 AK076400 AK165351 BC116308 BC116309 BC090675 AK052705 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000103068.9:0 ENSMUST00000018516.10:0 ENSMUST00000130019.1:0 NM_001166685:0 NM_177088:0 AK076400:0 AK165351:0 BC116308:0 BC116309:0 BC090675:0 AK052705:0 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001166685 |
| Entrez ID: | 320162 |
| Nearest Unigene: | Mm.30524 |
| Nearest Refseq: | NM_177088 |
| Nearest Ensembl: | ENSMUSG00000018372 |
| Gene Name: | centrosomal protein 95 |
| Gene Alias: | 4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik |
| Gene Description: | centrosomal protein 95 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
