Difference between revisions of "TSS:Mm 99771.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENSMUST00000140447.3:51 NM_001372502:239 NM_001163473:239 NM_001372503:239 NM_001372504:239 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 9: | Line 9: | ||
|entrez_id=69066 | |entrez_id=69066 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=RIKEN cDNA 1810010H24 gene | |gene_description=RIKEN cDNA 1810010H24 gene | ||
| − | |gene_id= | + | |gene_id=69066 |
| − | |gene_name= | + | |gene_name=RIKEN cDNA 1810010H24 gene |
| − | |gene_source=MGI: | + | |gene_source=MGI:1916316 |
| − | |gene_symbol= | + | |gene_symbol=1810010H24Rik |
| − | |gene_synonyms= | + | |gene_synonyms=OTTMUSG00000003581 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=MGI: | + | |hgnc_mgi_id=MGI:1916316 |
|nearest_ensembl=ENSMUSG00000078607 | |nearest_ensembl=ENSMUSG00000078607 | ||
|nearest_promoter_id=NM_001163473 | |nearest_promoter_id=NM_001163473 | ||
|nearest_refseq=NM_001163473 | |nearest_refseq=NM_001163473 | ||
|nearest_unigene=Mm.40679 | |nearest_unigene=Mm.40679 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=107025604 | |start=107025604 | ||
|start_of_center_position=107025617 | |start_of_center_position=107025617 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000140447.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99771.1 | |tss_id=mm_99771.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1B0GR98 |
}} | }} | ||
Revision as of 03:59, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 107025617 |
|---|---|
| End of the center position in the TSS region: | 107025618 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000140447.3 |
|---|---|
| Distance: | 51 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000140447.3:51 NM_001372502:239 NM_001163473:239 NM_001372503:239 NM_001372504:239 |
TATA-Box annotation
| Distance to TSS: | -2606 |
|---|---|
| Nearest PromoterID: | NM_001163473 |
| Entrez ID: | 69066 |
| Nearest Unigene: | Mm.40679 |
| Nearest Refseq: | NM_001163473 |
| Nearest Ensembl: | ENSMUSG00000078607 |
| Gene Name: | RIKEN cDNA 1810010H24 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1810010H24 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
