Difference between revisions of "TSS:Mm 99772.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000140447. | + | |all_trans=NM_001372502:0 NM_001163473:0 NM_001372503:0 NM_001372504:0 ENSMUST00000140447.3:-173 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-2350 | |distance_to_tss=-2350 | ||
|end=107025892 | |end=107025892 | ||
| Line 9: | Line 9: | ||
|entrez_id=69066 | |entrez_id=69066 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=RIKEN cDNA 1810010H24 gene | |gene_description=RIKEN cDNA 1810010H24 gene | ||
| − | |gene_id= | + | |gene_id=69066 |
|gene_name=RIKEN cDNA 1810010H24 gene | |gene_name=RIKEN cDNA 1810010H24 gene | ||
|gene_source=MGI:1916316 | |gene_source=MGI:1916316 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001163473 | |nearest_refseq=NM_001163473 | ||
|nearest_unigene=Mm.40679 | |nearest_unigene=Mm.40679 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=107025853 | |start=107025853 | ||
|start_of_center_position=107025872 | |start_of_center_position=107025872 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001372502 NM_001163473 NM_001372503 NM_001372504 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99772.1 | |tss_id=mm_99772.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q08AU9 |
}} | }} | ||
Revision as of 03:59, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107025872 |
|---|---|
| End of the center position in the TSS region: | 107025873 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001372502 NM_001163473 NM_001372503 NM_001372504 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NM_001372502:0 NM_001163473:0 NM_001372503:0 NM_001372504:0 ENSMUST00000140447.3:-173 |
TATA-Box annotation
| Distance to TSS: | -2350 |
|---|---|
| Nearest PromoterID: | NM_001163473 |
| Entrez ID: | 69066 |
| Nearest Unigene: | Mm.40679 |
| Nearest Refseq: | NM_001163473 |
| Nearest Ensembl: | ENSMUSG00000078607 |
| Gene Name: | RIKEN cDNA 1810010H24 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1810010H24 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
