Difference between revisions of "TSS:Mm 99795.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI480719= | |AI480719= | ||
|P55= | |P55= | ||
| − | |all_trans=AK007680:0 ENSMUST00000106750.4:12 ENSMUST00000106752.9:-22 NM_025894 | + | |all_trans=AK007680:0 ENSMUST00000106750.4:12 LF231278:14 MA466855:14 ENSMUST00000106752.9:-22 NM_025894:-22 AK009969:-22 AK008646:-22 AK151242:-22 AK162779:-22 AK167236:-29 AK211509:38 AK017843:-38 BC004694:-40 AK160283:-41 AK011806:-45 AK150910:-45 AK152041:-45 AK152240:-53 AK005114:-57 AK206379:62 ENSMUST00000021063.12:-66 AK007619:-66 LF231279:72 MA466856:72 LF198962:-78 MA434539:-78 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 11: | Line 11: | ||
|entrez_id=66997 | |entrez_id=66997 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=1500002F15Rik | + | |gene_alias=1500002F15Rik{{!}}AI480719{{!}}P55 |
| − | |gene_description= | + | |gene_description=proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
|gene_id=66997 | |gene_id=66997 | ||
| − | |gene_name= | + | |gene_name=proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
|gene_source=MGI:1914247 | |gene_source=MGI:1914247 | ||
|gene_symbol=Psmd12 | |gene_symbol=Psmd12 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025894 | |nearest_refseq=NM_025894 | ||
|nearest_unigene=Mm.491171 | |nearest_unigene=Mm.491171 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=mouse | |species=mouse | ||
|start=107479549 | |start=107479549 | ||
Revision as of 03:59, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107479557 |
|---|---|
| End of the center position in the TSS region: | 107479558 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK007680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | AK007680:0 ENSMUST00000106750.4:12 LF231278:14 MA466855:14 ENSMUST00000106752.9:-22 NM_025894:-22 AK009969:-22 AK008646:-22 AK151242:-22 AK162779:-22 AK167236:-29 AK211509:38 AK017843:-38 BC004694:-40 AK160283:-41 AK011806:-45 AK150910:-45 AK152041:-45 AK152240:-53 AK005114:-57 AK206379:62 ENSMUST00000021063.12:-66 AK007619:-66 LF231279:72 MA466856:72 LF198962:-78 MA434539:-78 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_025894 |
| Entrez ID: | 66997 |
| Nearest Unigene: | Mm.491171 |
| Nearest Refseq: | NM_025894 |
| Nearest Ensembl: | ENSMUSG00000020720 |
| Gene Name: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
| Gene Alias: | 1500002F15Rik|AI480719|P55 |
| Gene Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
