Difference between revisions of "TSS:Mm 99848.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AU043124= | |AU043124= | ||
|Galpha13= | |Galpha13= | ||
| − | |all_trans=NM_010303 | + | |all_trans=NM_010303:55 ENSMUST00000106702.3:92 ENSMUST00000020930.13:92 NM_001359034:92 AK011851:92 M63660:107 AK149766:165 BC057665:201 BC049898:341 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 11: | Line 11: | ||
|entrez_id=14674 | |entrez_id=14674 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=AU024132 | + | |gene_alias=AU024132{{!}}AU043124{{!}}Galpha13 |
| − | |gene_description= | + | |gene_description=guanine nucleotide binding protein, alpha 13 |
|gene_id=14674 | |gene_id=14674 | ||
| − | |gene_name= | + | |gene_name=guanine nucleotide binding protein, alpha 13 |
|gene_source=MGI:95768 | |gene_source=MGI:95768 | ||
|gene_symbol=Gna13 | |gene_symbol=Gna13 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_010303 | |nearest_refseq=NM_010303 | ||
|nearest_unigene=Mm.193925 | |nearest_unigene=Mm.193925 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=109362706 | |start=109362706 | ||
|start_of_center_position=109362722 | |start_of_center_position=109362722 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_010303 | + | |transcript_name=NM_010303 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99848.1 | |tss_id=mm_99848.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9D034 |
}} | }} | ||
Revision as of 04:00, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109362722 |
|---|---|
| End of the center position in the TSS region: | 109362723 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_010303 |
|---|---|
| Distance: | 55 |
| Num_trans: | 9 |
| All_trans: | NM_010303:55 ENSMUST00000106702.3:92 ENSMUST00000020930.13:92 NM_001359034:92 AK011851:92 M63660:107 AK149766:165 BC057665:201 BC049898:341 |
TATA-Box annotation
| Distance to TSS: | -71 |
|---|---|
| Nearest PromoterID: | NM_010303 |
| Entrez ID: | 14674 |
| Nearest Unigene: | Mm.193925 |
| Nearest Refseq: | NM_010303 |
| Nearest Ensembl: | ENSMUSG00000020611 |
| Gene Name: | guanine nucleotide binding protein, alpha 13 |
| Gene Alias: | AU024132|AU043124|Galpha13 |
| Gene Description: | guanine nucleotide binding protein, alpha 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
