Difference between revisions of "TSS:Mm 99875.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ESTM12= | |ESTM12= | ||
|X83328= | |X83328= | ||
| − | |all_trans=ENSMUST00000092500.10:346 NM_025275 | + | |all_trans=ENSMUST00000092500.10:346 NM_025275:346 ENSMUST00000020929.16:376 AK077195:376 ENSMUST00000125108.1:382 AK143908:382 AK004062:387 AK075748:406 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 11: | Line 11: | ||
|entrez_id=13929 | |entrez_id=13929 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=AA408420 | + | |gene_alias=AA408420{{!}}ESTM12{{!}}X83328 |
|gene_description=archaelysin family metallopeptidase 2 | |gene_description=archaelysin family metallopeptidase 2 | ||
|gene_id=13929 | |gene_id=13929 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025275 | |nearest_refseq=NM_025275 | ||
|nearest_unigene=Mm.211850 | |nearest_unigene=Mm.211850 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=109425580 | |start=109425580 | ||
|start_of_center_position=109425590 | |start_of_center_position=109425590 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000092500.10 NM_025275 | + | |transcript_name=ENSMUST00000092500.10 NM_025275 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99875.1 | |tss_id=mm_99875.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B1AT59 | + | |uniprot_id=B1AT59 Q400C8 |
}} | }} | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109425590 |
|---|---|
| End of the center position in the TSS region: | 109425591 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000092500.10 NM_025275 |
|---|---|
| Distance: | 346 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000092500.10:346 NM_025275:346 ENSMUST00000020929.16:376 AK077195:376 ENSMUST00000125108.1:382 AK143908:382 AK004062:387 AK075748:406 |
TATA-Box annotation
| Distance to TSS: | -356 |
|---|---|
| Nearest PromoterID: | NM_025275 |
| Entrez ID: | 13929 |
| Nearest Unigene: | Mm.211850 |
| Nearest Refseq: | NM_025275 |
| Nearest Ensembl: | ENSMUSG00000020610 |
| Gene Name: | archaelysin family metallopeptidase 2 |
| Gene Alias: | AA408420|ESTM12|X83328 |
| Gene Description: | archaelysin family metallopeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
