Difference between revisions of "TSS:Mm 99884.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_040680 | + | |all_trans=NR_040680:0 ENSMUST00000154875.1:77 AK085963:77 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=predicted gene, 45916 |
|gene_id=100503496 | |gene_id=100503496 | ||
| − | |gene_name= | + | |gene_name=predicted gene, 45916 |
| − | |gene_source= | + | |gene_source=MGI:5825553 |
| − | |gene_symbol= | + | |gene_symbol=Gm45916 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=MGI:5825553 |
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_040680 | |nearest_promoter_id=NR_040680 | ||
|nearest_refseq=NR_040680 | |nearest_refseq=NR_040680 | ||
|nearest_unigene=Mm.265874 | |nearest_unigene=Mm.265874 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=109440072 | |start=109440072 | ||
|start_of_center_position=109440075 | |start_of_center_position=109440075 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NR_040680 | + | |transcript_name=NR_040680 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99884.1 | |tss_id=mm_99884.1 | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109440075 |
|---|---|
| End of the center position in the TSS region: | 109440076 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_040680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | NR_040680:0 ENSMUST00000154875.1:77 AK085963:77 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_040680 |
| Entrez ID: | 100503496 |
| Nearest Unigene: | Mm.265874 |
| Nearest Refseq: | NR_040680 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene, 45916 |
| Gene Alias: | - |
| Gene Description: | predicted gene, 45916 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
