Difference between revisions of "TSS:Mm 99885.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000154875.1:0 AK085963:0 NR_040680 | + | |all_trans=ENSMUST00000154875.1:0 AK085963:0 NR_040680:-20 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=predicted gene, 45916 |
| − | |gene_id=13929 | + | |gene_id=100503496 13929 |
| − | |gene_name=archaelysin family metallopeptidase 2 | + | |gene_name=archaelysin family metallopeptidase 2; predicted gene, 45916 |
| − | |gene_source=MGI:104837 | + | |gene_source=MGI:104837 MGI:5825553 |
| − | |gene_symbol=Amz2 | + | |gene_symbol=Amz2 Gm45916 |
|gene_synonyms=ESTM12 | |gene_synonyms=ESTM12 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=MGI:104837 | + | |hgnc_mgi_id=MGI:104837 MGI:5825553 |
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_040680 | |nearest_promoter_id=NR_040680 | ||
|nearest_refseq=NR_040680 | |nearest_refseq=NR_040680 | ||
|nearest_unigene=Mm.265874 | |nearest_unigene=Mm.265874 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=109440097 | |start=109440097 | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109440135 |
|---|---|
| End of the center position in the TSS region: | 109440136 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000154875.1 AK085963 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000154875.1:0 AK085963:0 NR_040680:-20 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NR_040680 |
| Entrez ID: | 100503496 |
| Nearest Unigene: | Mm.265874 |
| Nearest Refseq: | NR_040680 |
| Nearest Ensembl: | |
| Gene Name: | archaelysin family metallopeptidase 2; predicted gene, 45916 |
| Gene Alias: | - |
| Gene Description: | predicted gene, 45916 |
| Gene Type: | ncRNA |
| CpG%: | 0.09 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
