Difference between revisions of "TSS:Mm 99888.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MCT 7= | |MCT 7= | ||
|MCT6= | |MCT6= | ||
| − | |all_trans=ENSMUST00000106697.7:-26 | + | |all_trans=ENSMUST00000106697.7:-26 NM_001361975:179 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-26 | |distance=-26 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-220 |
|end=109485713 | |end=109485713 | ||
|end_of_center_position=109485673 | |end_of_center_position=109485673 | ||
| − | |entrez_id= | + | |entrez_id=74008 |
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias= | + | |gene_alias=6330406P08Rik{{!}}AI846872{{!}}ASG |
| − | |gene_description= | + | |gene_description=arylsulfatase G |
|gene_id=74008 | |gene_id=74008 | ||
|gene_name=arylsulfatase G | |gene_name=arylsulfatase G | ||
| Line 22: | Line 22: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1921258 | |hgnc_mgi_id=MGI:1921258 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000020604 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361975 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_028710 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.482224 |
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=109485631 | |start=109485631 | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109485672 |
|---|---|
| End of the center position in the TSS region: | 109485673 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106697.7 |
|---|---|
| Distance: | -26 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000106697.7:-26 NM_001361975:179 |
TATA-Box annotation
| Distance to TSS: | -220 |
|---|---|
| Nearest PromoterID: | NM_001361975 |
| Entrez ID: | 74008 |
| Nearest Unigene: | Mm.482224 |
| Nearest Refseq: | NM_028710 |
| Nearest Ensembl: | ENSMUSG00000020604 |
| Gene Name: | arylsulfatase G |
| Gene Alias: | 6330406P08Rik|AI846872|ASG |
| Gene Description: | arylsulfatase G |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
