Difference between revisions of "TSS:Mm 99893.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AW411817= | |AW411817= | ||
|D11Ertd498e= | |D11Ertd498e= | ||
| + | |all_trans=KY467616:171 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=171 |
|distance_to_tss=-2062 | |distance_to_tss=-2062 | ||
|end=109613460 | |end=109613460 | ||
| Line 10: | Line 11: | ||
|entrez_id=52639 | |entrez_id=52639 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=4930533H01Rik | + | |gene_alias=4930533H01Rik{{!}}AW411817{{!}}D11Ertd498e |
| − | |gene_description= | + | |gene_description=WD repeat domain, phosphoinositide interacting 1 |
| − | |gene_name= | + | |gene_id=102631572 |
| + | |gene_name=predicted gene 11685 | ||
| + | |gene_source=MGI:3651603 | ||
| + | |gene_symbol=Gm11685 | ||
| + | |gene_synonyms=Gm29875 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:3651603 | ||
|nearest_ensembl=ENSMUSG00000041895 | |nearest_ensembl=ENSMUSG00000041895 | ||
|nearest_promoter_id=NM_145940 | |nearest_promoter_id=NM_145940 | ||
|nearest_refseq=NM_145940 | |nearest_refseq=NM_145940 | ||
|nearest_unigene=Mm.35817 | |nearest_unigene=Mm.35817 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=mouse | |species=mouse | ||
|start=109613442 | |start=109613442 | ||
|start_of_center_position=109613451 | |start_of_center_position=109613451 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=KY467616 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99893.1 | |tss_id=mm_99893.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109613451 |
|---|---|
| End of the center position in the TSS region: | 109613452 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KY467616 |
|---|---|
| Distance: | 171 |
| Num_trans: | 1 |
| All_trans: | KY467616:171 |
TATA-Box annotation
| Distance to TSS: | -2062 |
|---|---|
| Nearest PromoterID: | NM_145940 |
| Entrez ID: | 52639 |
| Nearest Unigene: | Mm.35817 |
| Nearest Refseq: | NM_145940 |
| Nearest Ensembl: | ENSMUSG00000041895 |
| Gene Name: | predicted gene 11685 |
| Gene Alias: | 4930533H01Rik|AW411817|D11Ertd498e |
| Gene Description: | WD repeat domain, phosphoinositide interacting 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
