Difference between revisions of "TSS:Mm 99918.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Prkmk6= | |Prkmk6= | ||
|SAPKK3= | |SAPKK3= | ||
| − | |all_trans=ENSMUST00000020949.11:0 ENSMUST00000100260 | + | |all_trans=ENSMUST00000020949.11:0 ENSMUST00000100260.1:0 AK053547:0 AK138757:0 AK043482:0 AK086722:0 AK077712:0 AK140289:0 AK141708:0 AK162671:13 NM_011943:-14 NM_001356353:-14 NM_001356352:-14 NM_001356345:-14 ENSMUST00000146084.7:104 U39066:104 X97052:109 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=33 |
|end=110399155 | |end=110399155 | ||
|end_of_center_position=110399136 | |end_of_center_position=110399136 | ||
|entrez_id=26399 | |entrez_id=26399 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=MEK6 | + | |gene_alias=MAPKK 6{{!}}MAPKK6{{!}}MEK6{{!}}MKK6{{!}}Prkmk6{{!}}SAPKK3 |
|gene_description=mitogen-activated protein kinase kinase 6 | |gene_description=mitogen-activated protein kinase kinase 6 | ||
|gene_id=26399 | |gene_id=26399 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1346870 | |hgnc_mgi_id=MGI:1346870 | ||
|nearest_ensembl=ENSMUSG00000020623 | |nearest_ensembl=ENSMUSG00000020623 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001356352 |
|nearest_refseq=NM_011943 | |nearest_refseq=NM_011943 | ||
|nearest_unigene=Mm.14487 | |nearest_unigene=Mm.14487 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=110399135 | |start_of_center_position=110399135 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000020949.11 ENSMUST00000100260 | + | |transcript_name=ENSMUST00000020949.11 ENSMUST00000100260.1 AK053547 AK138757 AK043482 AK086722 AK077712 AK140289 AK141708 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99918.1 | |tss_id=mm_99918.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2AGS2 | + | |uniprot_id=A2AGS2 Q3UU57 Q543Z5 Q8BP44 Q8C371 |
}} | }} | ||
Revision as of 04:02, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 110399135 |
|---|---|
| End of the center position in the TSS region: | 110399136 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000020949.11 ENSMUST00000100260.1 AK053547 AK138757 AK043482 AK086722 AK077712 AK140289 AK141708 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000020949.11:0 ENSMUST00000100260.1:0 AK053547:0 AK138757:0 AK043482:0 AK086722:0 AK077712:0 AK140289:0 AK141708:0 AK162671:13 NM_011943:-14 NM_001356353:-14 NM_001356352:-14 NM_001356345:-14 ENSMUST00000146084.7:104 U39066:104 X97052:109 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001356352 |
| Entrez ID: | 26399 |
| Nearest Unigene: | Mm.14487 |
| Nearest Refseq: | NM_011943 |
| Nearest Ensembl: | ENSMUSG00000020623 |
| Gene Name: | mitogen-activated protein kinase kinase 6 |
| Gene Alias: | MAPKK 6|MAPKK6|MEK6|MKK6|Prkmk6|SAPKK3 |
| Gene Description: | mitogen-activated protein kinase kinase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
