Difference between revisions of "TSS:Mm 99927.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI132396= | |AI132396= | ||
|Kir5.1= | |Kir5.1= | ||
| − | |all_trans=ENSMUST00000106635.1:425 NM_001252209 | + | |all_trans=ENSMUST00000106635.1:425 NM_001252209:425 AK032192:459 AK140249:464 AK045447:471 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 11: | Line 11: | ||
|entrez_id=16517 | |entrez_id=16517 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=6430410F18Rik | + | |gene_alias=6430410F18Rik{{!}}AI132396{{!}}Kir5.1 |
| − | |gene_description= | + | |gene_description=potassium inwardly-rectifying channel, subfamily J, member 16 |
|gene_id=16517 | |gene_id=16517 | ||
| − | |gene_name= | + | |gene_name=potassium inwardly-rectifying channel, subfamily J, member 16 |
|gene_source=MGI:1314842 | |gene_source=MGI:1314842 | ||
|gene_symbol=Kcnj16 | |gene_symbol=Kcnj16 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_010604 | |nearest_refseq=NM_010604 | ||
|nearest_unigene=Mm.30176 | |nearest_unigene=Mm.30176 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=110997054 | |start=110997054 | ||
|start_of_center_position=110997058 | |start_of_center_position=110997058 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106635.1 NM_001252209 | + | |transcript_name=ENSMUST00000106635.1 NM_001252209 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99927.1 | |tss_id=mm_99927.1 | ||
Revision as of 04:02, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 110997058 |
|---|---|
| End of the center position in the TSS region: | 110997059 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106635.1 NM_001252209 |
|---|---|
| Distance: | 425 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000106635.1:425 NM_001252209:425 AK032192:459 AK140249:464 AK045447:471 |
TATA-Box annotation
| Distance to TSS: | -429 |
|---|---|
| Nearest PromoterID: | NM_001252209 |
| Entrez ID: | 16517 |
| Nearest Unigene: | Mm.30176 |
| Nearest Refseq: | NM_010604 |
| Nearest Ensembl: | ENSMUSG00000051497 |
| Gene Name: | potassium inwardly-rectifying channel, subfamily J, member 16 |
| Gene Alias: | 6430410F18Rik|AI132396|Kir5.1 |
| Gene Description: | potassium inwardly-rectifying channel, subfamily J, member 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
