Difference between revisions of "TSS:Mm 99951.1"
From referenceTSS
| Line 10: | Line 10: | ||
|entrez_id=20682 | |entrez_id=20682 | ||
|gc_percent=0.273632 | |gc_percent=0.273632 | ||
| − | |gene_alias=2010306G03Rik | + | |gene_alias=2010306G03Rik{{!}}AV220920{{!}}mKIAA4243 |
|gene_description=SRY (sex determining region Y)-box 9 | |gene_description=SRY (sex determining region Y)-box 9 | ||
|gene_id=20682 | |gene_id=20682 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=112786872 | |start_of_center_position=112786872 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=4(CTGTCTTTAAGG,-,0.00) |
|transcript_name=AK008535 | |transcript_name=AK008535 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 112786872 |
|---|---|
| End of the center position in the TSS region: | 112786873 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK008535 |
|---|---|
| Distance: | 48 |
| Num_trans: | 1 |
| All_trans: | AK008535:48 |
TATA-Box annotation
| Distance to TSS: | 4662 |
|---|---|
| Nearest PromoterID: | NM_011448 |
| Entrez ID: | 20682 |
| Nearest Unigene: | Mm.286407 |
| Nearest Refseq: | NM_011448 |
| Nearest Ensembl: | ENSMUSG00000000567 |
| Gene Name: | SRY (sex determining region Y)-box 9 |
| Gene Alias: | 2010306G03Rik|AV220920|mKIAA4243 |
| Gene Description: | SRY (sex determining region Y)-box 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.273632 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 4(CTGTCTTTAAGG,-,0.00) |
