Difference between revisions of "TSS:Mm 99958.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Smstr-2= | |Smstr-2= | ||
|Smstr2= | |Smstr2= | ||
| − | |all_trans=ENSMUST00000146390.2:-39 ENSMUST00000106630.1:91 | + | |all_trans=ENSMUST00000146390.2:-39 NM_001042606:-54 NM_009217:-54 ENSMUST00000106630.1:91 X68951:96 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-39 | |distance=-39 | ||
| − | |distance_to_tss= | + | |distance_to_tss=56 |
|end=113619385 | |end=113619385 | ||
|end_of_center_position=113619383 | |end_of_center_position=113619383 | ||
|entrez_id=20606 | |entrez_id=20606 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=SRIF-1 | + | |gene_alias=SRIF-1{{!}}SS2R{{!}}SSTR-2{{!}}Smstr-2{{!}}Smstr2{{!}}sst2 |
|gene_description=somatostatin receptor 2 | |gene_description=somatostatin receptor 2 | ||
|gene_id=20606 | |gene_id=20606 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_009217 | |nearest_refseq=NM_009217 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|sst2= | |sst2= | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113619382 |
|---|---|
| End of the center position in the TSS region: | 113619383 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000146390.2 |
|---|---|
| Distance: | -39 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000146390.2:-39 NM_001042606:-54 NM_009217:-54 ENSMUST00000106630.1:91 X68951:96 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_009217 |
| Entrez ID: | 20606 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_009217 |
| Nearest Ensembl: | ENSMUSG00000047904 |
| Gene Name: | somatostatin receptor 2 |
| Gene Alias: | SRIF-1|SS2R|SSTR-2|Smstr-2|Smstr2|sst2 |
| Gene Description: | somatostatin receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
