Difference between revisions of "TSS:Mm 99977.1"
From referenceTSS
| Line 2: | Line 2: | ||
|5330435L01Rik= | |5330435L01Rik= | ||
|Sdk-2= | |Sdk-2= | ||
| − | |all_trans=AK006331:0 | + | |all_trans=AK006331:0 AK131679:-37 NR_166914:-66 NR_166915:-66 ENSMUST00000129365.1:-69 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-24466 |
|end=114091515 | |end=114091515 | ||
|end_of_center_position=114091495 | |end_of_center_position=114091495 | ||
|entrez_id=237979 | |entrez_id=237979 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=4632412F08Rik | + | |gene_alias=4632412F08Rik{{!}}5330435L01Rik{{!}}Sdk-2{{!}}mKIAA1514 |
|gene_description=sidekick cell adhesion molecule 2 | |gene_description=sidekick cell adhesion molecule 2 | ||
|gene_id=100041739 | |gene_id=100041739 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172800 | |nearest_refseq=NM_172800 | ||
|nearest_unigene=Mm.130504 | |nearest_unigene=Mm.130504 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=114091474 | |start=114091474 | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114091494 |
|---|---|
| End of the center position in the TSS region: | 114091495 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK006331 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | AK006331:0 AK131679:-37 NR_166914:-66 NR_166915:-66 ENSMUST00000129365.1:-69 |
TATA-Box annotation
| Distance to TSS: | -24466 |
|---|---|
| Nearest PromoterID: | NM_172800 |
| Entrez ID: | 237979 |
| Nearest Unigene: | Mm.130504 |
| Nearest Refseq: | NM_172800 |
| Nearest Ensembl: | ENSMUSG00000041592 |
| Gene Name: | RIKEN cDNA 1700025D23 gene |
| Gene Alias: | 4632412F08Rik|5330435L01Rik|Sdk-2|mKIAA1514 |
| Gene Description: | sidekick cell adhesion molecule 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
