Difference between revisions of "TSS:Mm 99990.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Dnai2= | |Dnai2= | ||
|Gm728= | |Gm728= | ||
| − | |all_trans=ENSMUST00000151053.7:0 ENSMUST00000069325.13:0 ENSMUST00000136403.7:0 NM_001034878 | + | |all_trans=ENSMUST00000151053.7:0 ENSMUST00000069325.13:0 ENSMUST00000136403.7:0 NM_001034878:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-9 |
|end=114727435 | |end=114727435 | ||
|end_of_center_position=114727410 | |end_of_center_position=114727410 | ||
|entrez_id=432611 | |entrez_id=432611 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=C030015H18Rik | + | |gene_alias=C030015H18Rik{{!}}Dnai2{{!}}Gm728{{!}}b2b3405Clo |
| − | |gene_description= | + | |gene_description=dynein, axonemal, intermediate chain 2 |
|gene_id=432611 | |gene_id=432611 | ||
| − | |gene_name= | + | |gene_name=dynein axonemal intermediate chain 2 |
|gene_source=MGI:2685574 | |gene_source=MGI:2685574 | ||
| − | |gene_symbol= | + | |gene_symbol=Dnai2 |
| − | |gene_synonyms=C030015H18Rik | + | |gene_synonyms=C030015H18Rik Dnaic2 b2b3405Clo |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2685574 | |hgnc_mgi_id=MGI:2685574 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001034878 | |nearest_refseq=NM_001034878 | ||
|nearest_unigene=Mm.212764 | |nearest_unigene=Mm.212764 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=114727384 | |start=114727384 | ||
|start_of_center_position=114727409 | |start_of_center_position=114727409 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000151053.7 ENSMUST00000069325.13 ENSMUST00000136403.7 NM_001034878 | + | |transcript_name=ENSMUST00000151053.7 ENSMUST00000069325.13 ENSMUST00000136403.7 NM_001034878 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99990.1 | |tss_id=mm_99990.1 | ||
Revision as of 04:04, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114727409 |
|---|---|
| End of the center position in the TSS region: | 114727410 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000151053.7 ENSMUST00000069325.13 ENSMUST00000136403.7 NM_001034878 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000151053.7:0 ENSMUST00000069325.13:0 ENSMUST00000136403.7:0 NM_001034878:0 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_001034878 |
| Entrez ID: | 432611 |
| Nearest Unigene: | Mm.212764 |
| Nearest Refseq: | NM_001034878 |
| Nearest Ensembl: | ENSMUSG00000034706 |
| Gene Name: | dynein axonemal intermediate chain 2 |
| Gene Alias: | C030015H18Rik|Dnai2|Gm728|b2b3405Clo |
| Gene Description: | dynein, axonemal, intermediate chain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
