Difference between revisions of "TSS:Mm 99991.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Dnai2= | |Dnai2= | ||
|Gm728= | |Gm728= | ||
| − | |all_trans=ENSMUST00000136403.7:-25 ENSMUST00000069325.13 | + | |all_trans=NM_001034878:-22 ENSMUST00000136403.7:-25 ENSMUST00000069325.13:-29 ENSMUST00000151053.7:-33 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance=- | + | |distance=-22 |
| − | |distance_to_tss= | + | |distance_to_tss=31 |
|end=114727460 | |end=114727460 | ||
|end_of_center_position=114727451 | |end_of_center_position=114727451 | ||
|entrez_id=432611 | |entrez_id=432611 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=C030015H18Rik | + | |gene_alias=C030015H18Rik{{!}}Dnai2{{!}}Gm728{{!}}b2b3405Clo |
| − | |gene_description= | + | |gene_description=dynein, axonemal, intermediate chain 2 |
|gene_id=432611 | |gene_id=432611 | ||
| − | |gene_name= | + | |gene_name=dynein axonemal intermediate chain 2 |
|gene_source=MGI:2685574 | |gene_source=MGI:2685574 | ||
| − | |gene_symbol= | + | |gene_symbol=Dnai2 |
| − | |gene_synonyms=C030015H18Rik | + | |gene_synonyms=C030015H18Rik Dnaic2 b2b3405Clo |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2685574 | |hgnc_mgi_id=MGI:2685574 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001034878 | |nearest_refseq=NM_001034878 | ||
|nearest_unigene=Mm.212764 | |nearest_unigene=Mm.212764 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=114727440 | |start=114727440 | ||
|start_of_center_position=114727450 | |start_of_center_position=114727450 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001034878 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99991.1 | |tss_id=mm_99991.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3UU98 |
}} | }} | ||
Revision as of 04:04, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114727450 |
|---|---|
| End of the center position in the TSS region: | 114727451 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001034878 |
|---|---|
| Distance: | -22 |
| Num_trans: | 4 |
| All_trans: | NM_001034878:-22 ENSMUST00000136403.7:-25 ENSMUST00000069325.13:-29 ENSMUST00000151053.7:-33 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_001034878 |
| Entrez ID: | 432611 |
| Nearest Unigene: | Mm.212764 |
| Nearest Refseq: | NM_001034878 |
| Nearest Ensembl: | ENSMUSG00000034706 |
| Gene Name: | dynein axonemal intermediate chain 2 |
| Gene Alias: | C030015H18Rik|Dnai2|Gm728|b2b3405Clo |
| Gene Description: | dynein, axonemal, intermediate chain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
