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Difference between revisions of "TSS:Mm 99998.1"

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Line 2: Line 2:
 
|3200002M13Rik=
 
|3200002M13Rik=
 
|Raig3=
 
|Raig3=
|all_trans=ENSMUST00000133245.1:12 ENSMUST00000122967.2:33 NM_001110337:392 uc007mfw.2:392 ENSMUST00000177952.7:400 NM_001110338:400 uc011yhg.1:400 AY079516:401
+
|all_trans=ENSMUST00000133245.1:12 ENSMUST00000122967.2:33 NM_001110337:392 ENSMUST00000177952.7:400 NM_001110338:400 AY079516:401
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 11: Line 11:
 
|entrez_id=70355
 
|entrez_id=70355
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=1110028I06Rik
+
|gene_alias=1110028I06Rik{{!}}3200002M13Rik{{!}}Raig3
|gene_description="G protein-coupled receptor, family C, group 5, member C"
+
|gene_description=G protein-coupled receptor, family C, group 5, member C
 
|gene_id=70355
 
|gene_id=70355
|gene_name="G protein-coupled receptor, family C, group 5, member C"
+
|gene_name=G protein-coupled receptor, family C, group 5, member C
 
|gene_source=MGI:1917605
 
|gene_source=MGI:1917605
 
|gene_symbol=Gprc5c
 
|gene_symbol=Gprc5c
Line 24: Line 24:
 
|nearest_refseq=NM_147217
 
|nearest_refseq=NM_147217
 
|nearest_unigene=Mm.242413
 
|nearest_unigene=Mm.242413
|num_trans=8
+
|num_trans=6
 
|species=mouse
 
|species=mouse
 
|start=114851122
 
|start=114851122

Revision as of 04:04, 22 June 2021

Basic information about the TSS


TSS ID:mm_99998.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114851122
End:114851140
Strand:+
TSS Score:1
Start of the center position in the TSS region:114851131
End of the center position in the TSS region:114851132



Gene and protein annotation


Transcript_name:ENSMUST00000133245.1
Distance:12
GeneID:70355
HGNC/MGI_ID:MGI:1917605
UniProt_ID:B7FAU0
Gene_name:G protein-coupled receptor, family C, group 5, member C
Gene_symbol:Gprc5c
Gene_synonyms:1110028I06Rik 3200002M13Rik
Gene_source:MGI:1917605



Transcript annotation


Transcript_name:ENSMUST00000133245.1
Distance:12
Num_trans:6
All_trans:ENSMUST00000133245.1:12 ENSMUST00000122967.2:33 NM_001110337:392 ENSMUST00000177952.7:400 NM_001110338:400 AY079516:401



TATA-Box annotation


Distance to TSS:-401
Nearest PromoterID:NM_001110337
Entrez ID:70355
Nearest Unigene:Mm.242413
Nearest Refseq:NM_147217
Nearest Ensembl:ENSMUSG00000051043
Gene Name:G protein-coupled receptor, family C, group 5, member C
Gene Alias:1110028I06Rik|3200002M13Rik|Raig3
Gene Description:G protein-coupled receptor, family C, group 5, member C
Gene Type:protein-coding
CpG%:0.04
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):