Difference between revisions of "TSS:Hg 236110.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000537245.6:28 AK294875:28 NM_001265592:-107 AK125550:-266 NM_001042663:-288 AB018263:-288 ENST00000400915.8:-300 ENST00000377732.5:428 BC042606:428 | |all_trans=ENST00000537245.6:28 AK294875:28 NM_001265592:-107 AK125550:-266 NM_001042663:-288 AB018263:-288 ENST00000400915.8:-300 ENST00000377732.5:428 BC042606:428 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=28 | |distance=28 | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
| − | |end= | + | |end=6497124 |
|end_of_center_position=6497124 | |end_of_center_position=6497124 | ||
|entrez_id=548593 | |entrez_id=548593 | ||
| Line 24: | Line 24: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=6497123 |
|start_of_center_position=6497123 | |start_of_center_position=6497123 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000537245.6 AK294875 | |transcript_name=ENST00000537245.6 AK294875 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 10:02, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6497123 |
|---|---|
| End of the center position in the TSS region: | 6497124 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000537245.6 AK294875 |
|---|---|
| Distance: | 28 |
| Num_trans: | 9 |
| All_trans: | ENST00000537245.6:28 AK294875:28 NM_001265592:-107 AK125550:-266 NM_001042663:-288 AB018263:-288 ENST00000400915.8:-300 ENST00000377732.5:428 BC042606:428 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001015000 |
| Entrez ID: | 548593 |
| Nearest Unigene: | Hs.729791 |
| Nearest Refseq: | NM_001014999 |
| Nearest Ensembl: | ENSG00000132207 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | GIYD1 |
| Gene Description: | SLX1 homolog A, structure-specific endonuclease subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
