Difference between revisions of "TSS:Hg 237076.1"
From referenceTSS
| Line 6: | Line 6: | ||
|HEL-176= | |HEL-176= | ||
|all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 | |all_trans=ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 | ||
| − | |chr= | + | |chr=chr18 |
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-84 | |distance=-84 | ||
|distance_to_tss=2704 | |distance_to_tss=2704 | ||
| − | |end= | + | |end=3453858 |
|end_of_center_position=3453858 | |end_of_center_position=3453858 | ||
|entrez_id=71 | |entrez_id=71 | ||
| Line 29: | Line 29: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=3453857 |
|start_of_center_position=3453857 | |start_of_center_position=3453857 | ||
|strand=+ | |strand=+ | ||
Revision as of 10:24, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3453857 |
|---|---|
| End of the center position in the TSS region: | 3453858 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000549468.5 ENST00000400167.6 NM_173211 |
|---|---|
| Distance: | -84 |
| Num_trans: | 3 |
| All_trans: | ENST00000549468.5:-84 ENST00000400167.6:-84 NM_173211:-84 |
TATA-Box annotation
| Distance to TSS: | 2704 |
|---|---|
| Nearest PromoterID: | NM_001199954 |
| Entrez ID: | 71 |
| Nearest Unigene: | Hs.514581 |
| Nearest Refseq: | NM_001614 |
| Nearest Ensembl: | ENSG00000184009 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | ACT|ACTG|DFNA20|DFNA26|HEL-176 |
| Gene Description: | actin gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
