Difference between revisions of "TSS:Hg 242678.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000648948.2:-44 NM_031466:-44 AK128755:-44 | |all_trans=ENST00000648948.2:-44 NM_031466:-44 AK128755:-44 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-44 | |distance=-44 | ||
|distance_to_tss=17694 | |distance_to_tss=17694 | ||
| − | |end= | + | |end=140458535 |
|end_of_center_position=140458535 | |end_of_center_position=140458535 | ||
|entrez_id=100506776 | |entrez_id=100506776 | ||
| Line 24: | Line 24: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=140458534 |
|start_of_center_position=140458534 | |start_of_center_position=140458534 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000648948.2 NM_031466 AK128755 | |transcript_name=ENST00000648948.2 NM_031466 AK128755 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242678.1 | |tss_id=hg_242678.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q96Q05 | |uniprot_id=Q96Q05 | ||
}} | }} | ||
Revision as of 12:33, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 140458534 |
|---|---|
| End of the center position in the TSS region: | 140458535 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000648948.2 NM_031466 AK128755 |
|---|---|
| Distance: | -44 |
| Num_trans: | 3 |
| All_trans: | ENST00000648948.2:-44 NM_031466:-44 AK128755:-44 |
TATA-Box annotation
| Distance to TSS: | 17694 |
|---|---|
| Nearest PromoterID: | NR_040085 |
| Entrez ID: | 100506776 |
| Nearest Unigene: | Hs.173034 |
| Nearest Refseq: | NR_040085 |
| Nearest Ensembl: | ENSG00000281103 |
| Gene Name: | trafficking protein particle complex subunit 9 |
| Gene Alias: | TCRGV |
| Gene Description: | T cell receptor gamma locus antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
