Difference between revisions of "TSS:Hg 242850.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GCS1L= | |GCS1L= | ||
|all_trans=ENST00000521628.1:-278 | |all_trans=ENST00000521628.1:-278 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=-278 | |distance=-278 | ||
|distance_to_tss=60 | |distance_to_tss=60 | ||
| − | |end= | + | |end=48049873 |
|end_of_center_position=48049866 | |end_of_center_position=48049866 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
| Line 26: | Line 26: | ||
|p42IP4= | |p42IP4= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=48049857 |
|start_of_center_position=48049865 | |start_of_center_position=48049865 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000521628.1 | |transcript_name=ENST00000521628.1 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_242850.1 | |tss_id=hg_242850.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:37, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48049865 |
|---|---|
| End of the center position in the TSS region: | 48049866 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000521628.1 |
|---|---|
| Distance: | -278 |
| Num_trans: | 1 |
| All_trans: | ENST00000521628.1:-278 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001284310 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ubiquitin conjugating enzyme E2 V2 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
