Personal tools

Difference between revisions of "TSS:Hg 243029.1"

From referenceTSS

Jump to: navigation, search
Line 4: Line 4:
 
|GSDMDC1=
 
|GSDMDC1=
 
|all_trans=ENST00000674948.1:57 LF206472:235 MA442049:235 ENST00000676121.1:240 ENST00000675938.1:241 ENST00000675400.1:250 ENST00000374647.10:261 ENST00000676429.1:261 ENST00000674704.1:261 NM_003640:261 NM_001330749:261 NM_001318360:261 AK289962:261 ENST00000675765.1:263 ENST00000674938.1:263 AF153419:267 ENST00000675602.1:269 AK001641:269 ENST00000675215.1:270 ENST00000675078.1:272 ENST00000676044.1:272 ENST00000675979.1:272 ENST00000675325.1:272 ENST00000495759.6:272 ENST00000675893.1:272 ENST00000675943.1:272 ENST00000675535.1:272 ENST00000674890.1:272 ENST00000675233.1:272 ENST00000676086.1:272 ENST00000674836.1:272 ENST00000675406.1:272 ENST00000676237.1:272 ENST00000675825.1:272 ENST00000676424.1:272 ENST00000675647.1:272 ENST00000675877.1:272 ENST00000675052.1:272 ENST00000674535.1:272 ENST00000675566.1:272 ENST00000675507.1:272 ENST00000675727.1:272 AF044195:275 ENST00000675748.1:289 AB210033:291 AK225798:298 AK304742:411 ENST00000537196.1:432 CR749385:432 ENST00000676416.1:442 BC033094:491
 
|all_trans=ENST00000674948.1:57 LF206472:235 MA442049:235 ENST00000676121.1:240 ENST00000675938.1:241 ENST00000675400.1:250 ENST00000374647.10:261 ENST00000676429.1:261 ENST00000674704.1:261 NM_003640:261 NM_001330749:261 NM_001318360:261 AK289962:261 ENST00000675765.1:263 ENST00000674938.1:263 AF153419:267 ENST00000675602.1:269 AK001641:269 ENST00000675215.1:270 ENST00000675078.1:272 ENST00000676044.1:272 ENST00000675979.1:272 ENST00000675325.1:272 ENST00000495759.6:272 ENST00000675893.1:272 ENST00000675943.1:272 ENST00000675535.1:272 ENST00000674890.1:272 ENST00000675233.1:272 ENST00000676086.1:272 ENST00000674836.1:272 ENST00000675406.1:272 ENST00000676237.1:272 ENST00000675825.1:272 ENST00000676424.1:272 ENST00000675647.1:272 ENST00000675877.1:272 ENST00000675052.1:272 ENST00000674535.1:272 ENST00000675566.1:272 ENST00000675507.1:272 ENST00000675727.1:272 AF044195:275 ENST00000675748.1:289 AB210033:291 AK225798:298 AK304742:411 ENST00000537196.1:432 CR749385:432 ENST00000676416.1:442 BC033094:491
−
|chr=chr8
+
|chr=chr9
 
|cpg_percent=0.035
 
|cpg_percent=0.035
 
|distance=57
 
|distance=57
 
|distance_to_tss=3037
 
|distance_to_tss=3037
−
|end=143561384
+
|end=108934385
 
|end_of_center_position=108934385
 
|end_of_center_position=108934385
 
|entrez_id=79792
 
|entrez_id=79792
Line 27: Line 27:
 
|num_trans=51
 
|num_trans=51
 
|species=human
 
|species=human
−
|start=143561382
+
|start=108934384
 
|start_of_center_position=108934384
 
|start_of_center_position=108934384
 
|strand=-
 
|strand=-

Revision as of 12:41, 14 July 2021

Basic information about the TSS

TSS ID:hg_243029.1
Species:human
Chr:chr9
TSS Classification:yes
Start:108934384
End:108934385
Strand:-
TSS Score:1
Start of the center position in the TSS region:108934384
End of the center position in the TSS region:108934385



Gene and protein annotation

Transcript_name:ENST00000674948.1
Distance:57
GeneID:8518
HGNC/MGI_ID:HGNC:5959
UniProt_ID:
Gene_name:elongator acetyltransferase complex subunit 1
Gene_symbol:ELP1
Gene_synonyms:IKAP IKI3 TOT1
Gene_source:HGNC:5959



Transcript annotation

Transcript_name:ENST00000674948.1
Distance:57
Num_trans:51
All_trans:ENST00000674948.1:57 LF206472:235 MA442049:235 ENST00000676121.1:240 ENST00000675938.1:241 ENST00000675400.1:250 ENST00000374647.10:261 ENST00000676429.1:261 ENST00000674704.1:261 NM_003640:261 NM_001330749:261 NM_001318360:261 AK289962:261 ENST00000675765.1:263 ENST00000674938.1:263 AF153419:267 ENST00000675602.1:269 AK001641:269 ENST00000675215.1:270 ENST00000675078.1:272 ENST00000676044.1:272 ENST00000675979.1:272 ENST00000675325.1:272 ENST00000495759.6:272 ENST00000675893.1:272 ENST00000675943.1:272 ENST00000675535.1:272 ENST00000674890.1:272 ENST00000675233.1:272 ENST00000676086.1:272 ENST00000674836.1:272 ENST00000675406.1:272 ENST00000676237.1:272 ENST00000675825.1:272 ENST00000676424.1:272 ENST00000675647.1:272 ENST00000675877.1:272 ENST00000675052.1:272 ENST00000674535.1:272 ENST00000675566.1:272 ENST00000675507.1:272 ENST00000675727.1:272 AF044195:275 ENST00000675748.1:289 AB210033:291 AK225798:298 AK304742:411 ENST00000537196.1:432 CR749385:432 ENST00000676416.1:442 BC033094:491



TATA-Box annotation

Distance to TSS:3037
Nearest PromoterID:NM_024736
Entrez ID:79792
Nearest Unigene:Hs.118983
Nearest Refseq:NM_024736
Nearest Ensembl:ENSG00000104518
Gene Name:elongator acetyltransferase complex subunit 1
Gene Alias:DF5L|DFNA5L|FKSG10|GSDMDC1
Gene Description:gasdermin D
Gene Type:protein-coding
CpG%:0.035
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
Retrieved from "http://reftss.riken.jp/reftss-v3/index.php?title=TSS:Hg_243029.1&oldid=1490796"