Difference between revisions of "TSS:Hg 243163.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 BC146961:-33 BC146946:-33 | |all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 BC146961:-33 BC146946:-33 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-10 | |distance=-10 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| − | |end= | + | |end=133580213 |
|end_of_center_position=133580213 | |end_of_center_position=133580213 | ||
|entrez_id=8749 | |entrez_id=8749 | ||
| Line 24: | Line 24: | ||
|num_trans=7 | |num_trans=7 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=133580212 |
|start_of_center_position=133580212 | |start_of_center_position=133580212 | ||
| − | |strand= | + | |strand=- |
|tMDCIII= | |tMDCIII= | ||
|transcript_name=BC152887 BC156625 BC156836 AB528863 | |transcript_name=BC152887 BC156625 BC156836 AB528863 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_243163.1 | |tss_id=hg_243163.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:44, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133580212 |
|---|---|
| End of the center position in the TSS region: | 133580213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC152887 BC156625 BC156836 AB528863 |
|---|---|
| Distance: | -10 |
| Num_trans: | 7 |
| All_trans: | BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 BC146961:-33 BC146946:-33 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_001190956 |
| Entrez ID: | 8749 |
| Nearest Unigene: | Hs.127930 |
| Nearest Refseq: | NM_014237 |
| Nearest Ensembl: | ENSG00000168619 |
| Gene Name: | family with sequence similarity 163 member B |
| Gene Alias: | ADAM27|tMDCIII |
| Gene Description: | ADAM metallopeptidase domain 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
