Difference between revisions of "TSS:Hg 243219.1"
From referenceTSS
| Line 6: | Line 6: | ||
|JCTN= | |JCTN= | ||
|all_trans=ENST00000380384.5:1 ENST00000315377.4:9 BC013296:-13 BC094826:-14 AB062123:-16 BC071907:-18 BC071908:-18 AK311861:-27 ENST00000380394.9:-29 ENST00000380381.3:-29 NM_001010:-29 AK291517:-29 BC027620:-29 D28348:-29 | |all_trans=ENST00000380384.5:1 ENST00000315377.4:9 BC013296:-13 BC094826:-14 AB062123:-16 BC071907:-18 BC071908:-18 AK311861:-27 ENST00000380394.9:-29 ENST00000380381.3:-29 NM_001010:-29 AK291517:-29 BC027620:-29 D28348:-29 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=1 | |distance=1 | ||
|distance_to_tss=26 | |distance_to_tss=26 | ||
| − | |end= | + | |end=19380207 |
|end_of_center_position=19380207 | |end_of_center_position=19380207 | ||
|entrez_id=444 | |entrez_id=444 | ||
| Line 30: | Line 30: | ||
|num_trans=14 | |num_trans=14 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=19380206 |
|start_of_center_position=19380206 | |start_of_center_position=19380206 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000380384.5 | |transcript_name=ENST00000380384.5 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 12:45, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19380206 |
|---|---|
| End of the center position in the TSS region: | 19380207 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000380384.5 |
|---|---|
| Distance: | 1 |
| Num_trans: | 14 |
| All_trans: | ENST00000380384.5:1 ENST00000315377.4:9 BC013296:-13 BC094826:-14 AB062123:-16 BC071907:-18 BC071908:-18 AK311861:-27 ENST00000380394.9:-29 ENST00000380381.3:-29 NM_001010:-29 AK291517:-29 BC027620:-29 D28348:-29 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_032466 |
| Entrez ID: | 444 |
| Nearest Unigene: | Hs.332422 |
| Nearest Refseq: | NM_004318 |
| Nearest Ensembl: | ENSG00000198363 |
| Gene Name: | ribosomal protein S6 |
| Gene Alias: | AAH|BAH|CASQ2BP1|FDLAB|HAAH|JCTN|junctin |
| Gene Description: | aspartate beta-hydroxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
