Difference between revisions of "TSS:Mm 101603.1"
From referenceTSS
| Line 33: | Line 33: | ||
|tata_box=-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) | |tata_box=-50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) | ||
|transcript_name=ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 AK157336 | |transcript_name=ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 AK157336 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_101603.1 | |tss_id=mm_101603.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=D6RGU3 Q5SRI3 Q8C3J5 | |uniprot_id=D6RGU3 Q5SRI3 Q8C3J5 | ||
}} | }} | ||
Revision as of 10:23, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34783875 |
|---|---|
| End of the center position in the TSS region: | 34783876 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093193.11 ENSMUST00000101365.8 ENSMUST00000154178.1 ENSMUST00000143540.7 AK089682 AK037611 AK089228 AK157336 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000093193.11:0 ENSMUST00000101365.8:0 ENSMUST00000154178.1:0 ENSMUST00000143540.7:0 AK089682:0 AK037611:0 AK089228:0 AK157336:0 NM_033374:-5 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_033374 |
| Entrez ID: | 94176 |
| Nearest Unigene: | Mm.380679 |
| Nearest Refseq: | NM_033374 |
| Nearest Ensembl: | ENSMUSG00000020143 |
| Gene Name: | dedicator of cyto-kinesis 2 |
| Gene Alias: | AI662014|AW122239|CED-5|Hch|MBC |
| Gene Description: | dedicator of cyto-kinesis 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -50(GAGTTTAAAAAG,-,0.00),-48(GTTTAAAAAGAG,+,0.00) |
