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Difference between revisions of "TSS:Hg 10003.1"

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Line 5: Line 5:
 
|PCMT=
 
|PCMT=
 
|PPMT=
 
|PPMT=
|all_trans=BC028168:0 AB590586:1 AF064084:-3 KJ893378:4 KJ905434:4 CR541671:5 CR541711:5 AK092890:-20 ENST00000343813.10:-21 NM_012405:-21 ENST00000489498.5:-29 ENST00000474756.1:-29 BC017037:-29
+
|all_trans=HGNC:5350
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 27: Line 27:
 
|nearest_refseq=NM_012405
 
|nearest_refseq=NM_012405
 
|nearest_unigene=Hs.515688
 
|nearest_unigene=Hs.515688
|num_trans=13
+
|num_trans=23463
 
|species=human
 
|species=human
 
|start=6235915
 
|start=6235915

Latest revision as of 17:34, 19 July 2021

Basic information about the TSS


TSS ID:hg_10003.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6235915
End:6235943
Strand:-
TSS Score:1
Start of the center position in the TSS region:6235929
End of the center position in the TSS region:6235930



Gene and protein annotation


Transcript_name:BC028168
Distance:0
GeneID:23463
HGNC/MGI_ID:HGNC:5350
UniProt_ID:
Gene_name:isoprenylcysteine carboxyl methyltransferase
Gene_symbol:ICMT
Gene_synonyms:HSTE14 PCCMT PPMT
Gene_source:HGNC:5350



Transcript annotation


Transcript_name:BC028168
Distance:0
Num_trans:23463
All_trans:HGNC:5350



TATA-Box annotation


Distance to TSS:35
Nearest PromoterID:NM_012405
Entrez ID:23463
Nearest Unigene:Hs.515688
Nearest Refseq:NM_012405
Nearest Ensembl:ENSG00000116237
Gene Name:isoprenylcysteine carboxyl methyltransferase
Gene Alias:HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT
Gene Description:isoprenylcysteine carboxyl methyltransferase
Gene Type:protein-coding
CpG%:0.16
GC%:0.791045
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):