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Difference between revisions of "TSS:Hg 100233.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK124391:-176 NR_027054:-276 NR_152879:-276 NR_152878:-276 NR_152877:-276 ENST00000670459.1:-303 ENST00000304425.4:-309 ENST00000663833.1:-333 ENST00000654736.1:-378
+
|all_trans=HGNC:37187
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 23: Line 23:
 
|nearest_refseq=NR_027054
 
|nearest_refseq=NR_027054
 
|nearest_unigene=Hs.458096
 
|nearest_unigene=Hs.458096
|num_trans=9
+
|num_trans=554202
 
|species=human
 
|species=human
 
|start=21559496
 
|start=21559496

Latest revision as of 17:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_100233.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21559496
End:21559522
Strand:-
TSS Score:1
Start of the center position in the TSS region:21559509
End of the center position in the TSS region:21559510



Gene and protein annotation


Transcript_name:AK124391
Distance:-176
GeneID:554202
HGNC/MGI_ID:HGNC:37187
UniProt_ID:
Gene_name:MIR31 host gene
Gene_symbol:MIR31HG
Gene_synonyms:LOC554202 LncHIFCAR hsa-lnc-31
Gene_source:HGNC:37187



Transcript annotation


Transcript_name:AK124391
Distance:-176
Num_trans:554202
All_trans:HGNC:37187



TATA-Box annotation


Distance to TSS:289
Nearest PromoterID:NR_152877
Entrez ID:554202
Nearest Unigene:Hs.458096
Nearest Refseq:NR_027054
Nearest Ensembl:
Gene Name:MIR31 host gene
Gene Alias:LncHIFCAR|hsa-lnc-31
Gene Description:MIR31 host gene
Gene Type:ncRNA
CpG%:0.095
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):