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Difference between revisions of "TSS:Hg 134533.1"

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Line 7: Line 7:
 
|RPO1-3=
 
|RPO1-3=
 
|TCS2=
 
|TCS2=
|all_trans=ENST00000637180.1:0 ENST00000621089.2:15 AK307356:17 ENST00000626064.1:-156 ENST00000627604.1:-171 NM_001206559:-171 NM_001374407:-171 ENST00000626929.1:-172 ENST00000637389.1:261
+
|all_trans=HGNC:20422
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 29: Line 29:
 
|nearest_refseq=NM_015972
 
|nearest_refseq=NM_015972
 
|nearest_unigene=Hs.507584
 
|nearest_unigene=Hs.507584
|num_trans=9
+
|num_trans=51082
 
|species=human
 
|species=human
 
|start=27620913
 
|start=27620913

Latest revision as of 06:04, 20 July 2021

Basic information about the TSS


TSS ID:hg_134533.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27620913
End:27620932
Strand:+
TSS Score:1
Start of the center position in the TSS region:27620922
End of the center position in the TSS region:27620923



Gene and protein annotation


Transcript_name:ENST00000637180.1
Distance:0
GeneID:51082
HGNC/MGI_ID:HGNC:20422
UniProt_ID:A0A087WTY1
Gene_name:RNA polymerase I and III subunit D
Gene_symbol:POLR1D
Gene_synonyms:AC19 MGC9850 RPA16 RPA9 RPAC2 RPO1-3
Gene_source:HGNC:20422



Transcript annotation


Transcript_name:ENST00000637180.1
Distance:0
Num_trans:51082
All_trans:HGNC:20422



TATA-Box annotation


Distance to TSS:180
Nearest PromoterID:NM_001206559
Entrez ID:51082
Nearest Unigene:Hs.507584
Nearest Refseq:NM_015972
Nearest Ensembl:ENSG00000186184
Gene Name:RNA polymerase I and III subunit D
Gene Alias:AC19|POLR1C|RPA16|RPA9|RPAC2|RPC16|RPO1-3|TCS2
Gene Description:RNA polymerase I and III subunit D
Gene Type:protein-coding
CpG%:0.08
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):