Difference between revisions of "TSS:Hg 234953.1"
From referenceTSS
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| − | {{ | + | {{TSSDetail |
|all_trans= | |all_trans= | ||
| − | + | |chr=chr1 | |
| − | |chr= | + | |cpg_percent=0.015 |
| − | |cpg_percent= | ||
|distance= | |distance= | ||
| − | |distance_to_tss= | + | |distance_to_tss=-449 |
| − | |end= | + | |end=36538 |
| − | |entrez_id= | + | |entrez_id=645520 |
| − | |gc_percent= | + | |gc_percent=0.517413 |
| − | |gene_alias= | + | |gene_alias=F379|FAM138F |
| − | |gene_description= | + | |gene_description=family with sequence similarity 138 member A |
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=FAM138A |
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000237613 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_026818 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_026818 |
| − | |nearest_unigene= | + | |nearest_unigene=Hs.569137 |
| − | |num_trans= | + | |num_trans=0 |
| + | |peakPage= | ||
|peak_id=hg_234953.1 | |peak_id=hg_234953.1 | ||
|peak_score= | |peak_score= | ||
| − | |start= | + | |species=human |
| − | |strand= | + | |start=36521 |
| + | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name= | |transcript_name= | ||
| + | |tss_classification=no | ||
| + | |tss_id=hg_234953.1 | ||
| + | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 00:51, 13 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -449 |
|---|---|
| Nearest PromoterID: | NR_026818 |
| Entrez ID: | 645520 |
| Nearest Unigene: | Hs.569137 |
| Nearest Refseq: | NR_026818 |
| Nearest Ensembl: | ENSG00000237613 |
| Gene Name: | FAM138A |
| Gene Alias: | F379 |
| Gene Description: | family with sequence similarity 138 member A |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
