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Difference between revisions of "TSS:Hg 3079.1"

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Line 4: Line 4:
 
|NFI-A=
 
|NFI-A=
 
|NFI-L=
 
|NFI-L=
|all_trans=AB037860:12 ENST00000664149.1:102 ENST00000670151.1:102 ENST00000662015.1:127 ENST00000403491.8:265 NM_005595:265 NM_001134673:265 AK299356:271 ENST00000371187.7:325 BC022264:327 ENST00000371189.8:-361 AK299579:-361 ENST00000485903.6:427 ENST00000371185.6:452 ENST00000479364.1:-456 ENST00000371184.6:458 NM_001145512:-484 CU692518:496 AB384210:496 DQ893250:496 DQ896579:496 KJ905238:496
+
|all_trans=HGNC:7784
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 26: Line 26:
 
|nearest_refseq=NM_005595
 
|nearest_refseq=NM_005595
 
|nearest_unigene=Hs.740757
 
|nearest_unigene=Hs.740757
|num_trans=22
+
|num_trans=4774
 
|species=human
 
|species=human
 
|start=61082222
 
|start=61082222

Latest revision as of 17:43, 21 July 2021

Basic information about the TSS


TSS ID:hg_3079.1
Species:human
Chr:chr1
TSS Classification:yes
Start:61082222
End:61082296
Strand:+
TSS Score:1
Start of the center position in the TSS region:61082259
End of the center position in the TSS region:61082260



Gene and protein annotation


Transcript_name:AB037860
Distance:12
GeneID:4774
HGNC/MGI_ID:HGNC:7784
UniProt_ID:
Gene_name:nuclear factor I A
Gene_symbol:NFIA
Gene_synonyms:KIAA1439 NFI-L
Gene_source:HGNC:7784



Transcript annotation


Transcript_name:AB037860
Distance:12
Num_trans:4774
All_trans:HGNC:7784



TATA-Box annotation


Distance to TSS:-302
Nearest PromoterID:NM_005595
Entrez ID:4774
Nearest Unigene:Hs.740757
Nearest Refseq:NM_005595
Nearest Ensembl:ENSG00000162599
Gene Name:nuclear factor I A
Gene Alias:BRMUTD|CTF|NF-I/A|NF1-A|NFI-A|NFI-L
Gene Description:nuclear factor I A
Gene Type:protein-coding
CpG%:0.145
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):