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Difference between revisions of "TSS:Hg 42219.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC146752:-9 AB020698:-9 BC106029:-19 AK300425:-21 ENST00000417901.5:-37 BC142660:-37 BC142727:-43 ENST00000306026.5:-47 AK296447:-47 ENST00000434032.6:-60 AK294756:-60 ENST00000465902.1:93 ENST00000453664.5:-167 ENST00000398888.6:-167 NM_001199161:-167 NM_001351101:-167 NM_001351106:-167 NM_001199162:-167 NM_001351102:-167 NM_001351104:-167 NM_001351107:-167 NM_001351098:-167 NM_001351108:-167 NM_001351099:-167 NM_001351103:-167 NM_006677:-167 NM_001351105:-167 NM_001351100:-167 NM_001199160:-167 LF208631:-273 MA444208:-273
+
|all_trans=HGNC:12617
 
|chr=chr3
 
|chr=chr3
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 22: Line 22:
 
|nearest_refseq=NM_006677
 
|nearest_refseq=NM_006677
 
|nearest_unigene=Hs.255596
 
|nearest_unigene=Hs.255596
|num_trans=31
+
|num_trans=10869
 
|species=human
 
|species=human
 
|start=49120760
 
|start=49120760

Latest revision as of 21:49, 21 July 2021

Basic information about the TSS


TSS ID:hg_42219.1
Species:human
Chr:chr3
TSS Classification:yes
Start:49120760
End:49120771
Strand:-
TSS Score:1
Start of the center position in the TSS region:49120765
End of the center position in the TSS region:49120766



Gene and protein annotation


Transcript_name:BC146752 AB020698
Distance:-9
GeneID:10869
HGNC/MGI_ID:HGNC:12617
UniProt_ID:
Gene_name:ubiquitin specific peptidase 19
Gene_symbol:USP19
Gene_synonyms:KIAA0891 ZMYND9
Gene_source:HGNC:12617



Transcript annotation


Transcript_name:BC146752 AB020698
Distance:-9
Num_trans:10869
All_trans:HGNC:12617



TATA-Box annotation


Distance to TSS:172
Nearest PromoterID:NM_001199162
Entrez ID:10869
Nearest Unigene:Hs.255596
Nearest Refseq:NM_006677
Nearest Ensembl:ENSG00000172046
Gene Name:ubiquitin specific peptidase 19
Gene Alias:ZMYND9
Gene Description:ubiquitin specific peptidase 19
Gene Type:protein-coding
CpG%:0.15
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):