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Difference between revisions of "TSS:Hg 82823.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000405358.8:29 LF332455:-128 MA568032:-128 U17163:-139 EU446473:-140 AB463032:-140 KJ891126:-144 ENST00000460438.5:-190 ENST00000476355.5:389 BC106762:-499 BC106763:-499
+
|all_trans=HGNC:3490
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_004956
 
|nearest_refseq=NM_004956
 
|nearest_unigene=Hs.22634
 
|nearest_unigene=Hs.22634
|num_trans=11
+
|num_trans=2115
 
|species=human
 
|species=human
 
|start=13988901
 
|start=13988901

Latest revision as of 12:30, 22 July 2021

Basic information about the TSS


TSS ID:hg_82823.1
Species:human
Chr:chr7
TSS Classification:yes
Start:13988901
End:13988913
Strand:-
TSS Score:1
Start of the center position in the TSS region:13988907
End of the center position in the TSS region:13988908



Gene and protein annotation


Transcript_name:ENST00000405358.8
Distance:29
GeneID:2115
HGNC/MGI_ID:HGNC:3490
UniProt_ID:B5MCT2
Gene_name:ETS variant transcription factor 1
Gene_symbol:ETV1
Gene_synonyms:ER81
Gene_source:HGNC:3490



Transcript annotation


Transcript_name:ENST00000405358.8
Distance:29
Num_trans:2115
All_trans:HGNC:3490



TATA-Box annotation


Distance to TSS:759
Nearest PromoterID:NM_001370556
Entrez ID:2115
Nearest Unigene:Hs.22634
Nearest Refseq:NM_004956
Nearest Ensembl:ENSG00000006468
Gene Name:ETS variant transcription factor 1
Gene Alias:ER81
Gene Description:ETS variant 1
Gene Type:protein-coding
CpG%:0.02
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):