Personal tools

Difference between revisions of "TSS:Mm 101497.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000134944.1:0 AK085420:0 KY467578:0 AK158233:0 KY467577:-2 NR_102312:-12 NR_102314:-12 NR_102311:-12 NR_102310:-12 AK158188:-12 ENSMUST00000129425.7:46 ENSMUST00000126265.1:46
+
|all_trans=MGI:3041224
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NR_102310
 
|nearest_refseq=NR_102310
 
|nearest_unigene=Mm.150222
 
|nearest_unigene=Mm.150222
|num_trans=12
+
|num_trans=414116
 
|species=mouse
 
|species=mouse
 
|start=31824518
 
|start=31824518

Latest revision as of 11:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_101497.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:31824518
End:31824535
Strand:-
TSS Score:1
Start of the center position in the TSS region:31824526
End of the center position in the TSS region:31824527



Gene and protein annotation


Transcript_name:ENSMUST00000134944.1 AK085420 KY467578 AK158233
Distance:0
GeneID:414116
HGNC/MGI_ID:MGI:3041224
UniProt_ID:
Gene_name:RIKEN cDNA D630024D03 gene
Gene_symbol:D630024D03Rik
Gene_synonyms:
Gene_source:MGI:3041224



Transcript annotation


Transcript_name:ENSMUST00000134944.1 AK085420 KY467578 AK158233
Distance:0
Num_trans:414116
All_trans:MGI:3041224



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NR_102311
Entrez ID:414116
Nearest Unigene:Mm.150222
Nearest Refseq:NR_102310
Nearest Ensembl:ENSMUSG00000085772
Gene Name:RIKEN cDNA D630024D03 gene
Gene Alias:-
Gene Description:RIKEN cDNA D630024D03 gene
Gene Type:ncRNA
CpG%:0.03
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):