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Difference between revisions of "TSS:Mm 112394.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK029281:-44 ENSMUST00000137804.1:-136 AK034644:-136 ENSMUST00000151023.7:-167 AK053056:-167 ENSMUST00000026360.8:-168 AK082444:-168 NM_177290:342 BC120691:342 BC125343:342 BC144785:342
+
|all_trans=MGI:1338035
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 22: Line 22:
 
|nearest_refseq=NM_177290
 
|nearest_refseq=NM_177290
 
|nearest_unigene=Mm.217000
 
|nearest_unigene=Mm.217000
|num_trans=11
+
|num_trans=320910
 
|species=mouse
 
|species=mouse
 
|start=119238617
 
|start=119238617

Latest revision as of 15:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_112394.1
Species:mouse
Chr:chr12
TSS Classification:yes
Start:119238617
End:119238634
Strand:-
TSS Score:1
Start of the center position in the TSS region:119238625
End of the center position in the TSS region:119238626



Gene and protein annotation


Transcript_name:AK029281
Distance:-44
GeneID:320910
HGNC/MGI_ID:MGI:1338035
UniProt_ID:
Gene_name:integrin beta 8
Gene_symbol:Itgb8
Gene_synonyms:4832412O06Rik
Gene_source:MGI:1338035



Transcript annotation


Transcript_name:AK029281
Distance:-44
Num_trans:320910
All_trans:MGI:1338035



TATA-Box annotation


Distance to TSS:-350
Nearest PromoterID:NM_177290
Entrez ID:320910
Nearest Unigene:Mm.217000
Nearest Refseq:NM_177290
Nearest Ensembl:ENSMUSG00000025321
Gene Name:integrin beta 8
Gene Alias:4832412O06Rik
Gene Description:integrin beta 8
Gene Type:protein-coding
CpG%:0.05
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):