Difference between revisions of "Template:PeakPage"
From referenceTSS
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<div style="width:42%; float:left;"> | <div style="width:42%; float:left;"> | ||
<table class="inner" > | <table class="inner" > | ||
− | <tr><th scope="row" class="item_label">TSS ID:</th><td>[[ | + | <tr><th scope="row" class="item_label">TSS ID:</th><td>[[tss_id::{{{tss_id}}}]]</td></tr> |
<tr><th scope="row" class="item_label">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr> | <tr><th scope="row" class="item_label">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr> | ||
<tr><th scope="row" class="item_label">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr> | <tr><th scope="row" class="item_label">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr> | ||
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<hr width="200px" size="2" align="left" noshade> | <hr width="200px" size="2" align="left" noshade> | ||
<table class="inner" style="width: 600px;table-layout:fixed;"> | <table class="inner" style="width: 600px;table-layout:fixed;"> | ||
− | <tr><th scope="row" class="item_label_long"> | + | <tr><th scope="row" class="item_label_long">TSS Score:</th><td class="ttb">[[tss_score::{{{tss_score}}}]]</td></tr> |
<tr><th scope="row" class="item_label_long">Distance to TSS:</th><td class="ttb">[[distance_to_tss::{{{distance_to_tss}}}]]</td></tr> | <tr><th scope="row" class="item_label_long">Distance to TSS:</th><td class="ttb">[[distance_to_tss::{{{distance_to_tss}}}]]</td></tr> | ||
<tr><th scope="row" class="item_label_long">Nearest PromoterID:</th><td class="ttb">[[nearest_promoter_id::{{{nearest_promoter_id}}}]]</td></tr> | <tr><th scope="row" class="item_label_long">Nearest PromoterID:</th><td class="ttb">[[nearest_promoter_id::{{{nearest_promoter_id}}}]]</td></tr> |
Revision as of 17:24, 14 February 2018
Basic information about the TSS
|
Gene and protein annotation
|
Transcript annotation
Transcript_name: | {{{transcript_name}}} |
---|---|
Distance: | {{{distance}}} |
Num_trans: | {{{num_trans}}} |
All_trans: | {{{all_trans}}} |
TSS classification
Chr: | {{{chr}}} |
---|---|
Start: | {{{start}}} |
End: | {{{end}}} |
Strand: | {{{strand}}} |
TATA-Box annotation
TSS Score: | {{{tss_score}}} |
---|---|
Distance to TSS: | {{{distance_to_tss}}} |
Nearest PromoterID: | {{{nearest_promoter_id}}} |
Entrez ID: | {{{entrez_id}}} |
Nearest Unigene: | {{{nearest_unigene}}} |
Nearest Refseq: | {{{nearest_refseq}}} |
Nearest Ensembl: | {{{nearest_ensembl}}} |
Gene Name: | {{{gene_name}}} |
Gene Alias: | {{{gene_alias}}} |
Gene Description: | {{{gene_description}}} |
Gene Type: | {{{gene_type}}} |
CpG%: | {{{cpg_percent}}} |
GC%: | {{{gc_percent}}} |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | {{{tata_box}}} |