Difference between revisions of "TSS:Mm 163241.1"
From referenceTSS
| Line 3: | Line 3: | ||
|OTTMUSG00000002847= | |OTTMUSG00000002847= | ||
|Rnf190= | |Rnf190= | ||
| − | |all_trans= | + | |all_trans=MGI:2443469 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_172568 | |nearest_refseq=NM_172568 | ||
|nearest_unigene=Mm.121570 | |nearest_unigene=Mm.121570 | ||
| − | |num_trans= | + | |num_trans=632687 |
|species=mouse | |species=mouse | ||
|start=105456759 | |start=105456759 | ||
|start_of_center_position=105456761 | |start_of_center_position=105456761 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000049995.9 ENSMUST00000100332.3 | + | |transcript_name=ENSMUST00000049995.9 ENSMUST00000100332.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_163241.1 | |tss_id=mm_163241.1 | ||
Latest revision as of 09:40, 27 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 105456761 |
|---|---|
| End of the center position in the TSS region: | 105456762 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000049995.9 ENSMUST00000100332.3 |
|---|---|
| Distance: | 25 |
| Num_trans: | 632687 |
| All_trans: | MGI:2443469 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_172568 |
| Entrez ID: | 632687 |
| Nearest Unigene: | Mm.121570 |
| Nearest Refseq: | NM_172568 |
| Nearest Ensembl: | ENSMUSG00000078627 |
| Gene Name: | membrane associated ring-CH-type finger 10 |
| Gene Alias: | 4933417C16Rik|AV039223|Rnf190 |
| Gene Description: | membrane-associated ring finger (C3HC4) 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
