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Difference between revisions of "TSS:Mm 1683.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK080815:264
+
|all_trans=MGI:1330828
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_009872
 
|nearest_refseq=NM_009872
 
|nearest_unigene=Mm.153833
 
|nearest_unigene=Mm.153833
|num_trans=1
+
|num_trans=12570
 
|p39=
 
|p39=
 
|species=mouse
 
|species=mouse

Latest revision as of 11:28, 27 July 2021

Basic information about the TSS


TSS ID:mm_1683.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:74856542
End:74856552
Strand:+
TSS Score:1
Start of the center position in the TSS region:74856547
End of the center position in the TSS region:74856548



Gene and protein annotation


Transcript_name:AK080815
Distance:264
GeneID:12570
HGNC/MGI_ID:MGI:1330828
UniProt_ID:
Gene_name:cyclin-dependent kinase 5, regulatory subunit 2 (p39)
Gene_symbol:Cdk5r2
Gene_synonyms:B230310J22Rik p39
Gene_source:MGI:1330828



Transcript annotation


Transcript_name:AK080815
Distance:264
Num_trans:12570
All_trans:MGI:1330828



TATA-Box annotation


Distance to TSS:1518
Nearest PromoterID:NM_009872
Entrez ID:12570
Nearest Unigene:Mm.153833
Nearest Refseq:NM_009872
Nearest Ensembl:ENSMUSG00000090071
Gene Name:cyclin-dependent kinase 5, regulatory subunit 2 (p39)
Gene Alias:B230310J22Rik|p39
Gene Description:cyclin-dependent kinase 5, regulatory subunit 2 (p39)
Gene Type:protein-coding
CpG%:0.03
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):