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Difference between revisions of "TSS:Mm 83958.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000128125.1:44 AK143982:44 AK085949:-94 ENSMUST00000135527.1:-104 NR_045886:-104 AK162906:-104
+
|all_trans=MGI:3642856
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 22: Line 22:
 
|nearest_refseq=NR_045886
 
|nearest_refseq=NR_045886
 
|nearest_unigene=Mm.361900
 
|nearest_unigene=Mm.361900
|num_trans=6
+
|num_trans=100038566
 
|species=mouse
 
|species=mouse
 
|start=57071850
 
|start=57071850

Latest revision as of 13:47, 28 July 2021

Basic information about the TSS


TSS ID:mm_83958.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:57071850
End:57071862
Strand:-
TSS Score:1
Start of the center position in the TSS region:57071856
End of the center position in the TSS region:57071857



Gene and protein annotation


Transcript_name:ENSMUST00000128125.1 AK143982
Distance:44
GeneID:100038566
HGNC/MGI_ID:MGI:3642856
UniProt_ID:Q3UNV3
Gene_name:predicted gene 10658
Gene_symbol:Gm10658
Gene_synonyms:
Gene_source:MGI:3642856



Transcript annotation


Transcript_name:ENSMUST00000128125.1 AK143982
Distance:44
Num_trans:100038566
All_trans:MGI:3642856



TATA-Box annotation


Distance to TSS:110
Nearest PromoterID:NR_045886
Entrez ID:100038566
Nearest Unigene:Mm.361900
Nearest Refseq:NR_045886
Nearest Ensembl:
Gene Name:predicted gene 10658
Gene Alias:-
Gene Description:predicted gene 10658
Gene Type:ncRNA
CpG%:0.04
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):