Personal tools

Difference between revisions of "TSS:Mm 99366.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK220485:0 BC132445:-6 AK172600:9 AK078552:10 AK142226:16 BC065064:19 ENSMUST00000156842.1:21 AK170616:21 NM_144831:-22 AK153829:-22 ENSMUST00000039152.13:-28 ENSMUST00000129741.1:33 ENSMUST00000125409.1:-59 LF198903:-60 MA434480:-60
+
|all_trans=MGI:1306823
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 24: Line 24:
 
|nearest_refseq=NM_144831
 
|nearest_refseq=NM_144831
 
|nearest_unigene=Mm.28186
 
|nearest_unigene=Mm.28186
|num_trans=15
+
|num_trans=217207
 
|species=mouse
 
|species=mouse
 
|start=101732977
 
|start=101732977

Latest revision as of 19:24, 28 July 2021

Basic information about the TSS


TSS ID:mm_99366.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101732977
End:101733008
Strand:+
TSS Score:1
Start of the center position in the TSS region:101732992
End of the center position in the TSS region:101732993



Gene and protein annotation


Transcript_name:AK220485
Distance:0
GeneID:217207
HGNC/MGI_ID:MGI:1306823
UniProt_ID:Q5DTN5
Gene_name:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene_symbol:Dhx8
Gene_synonyms:Ddx8 RNA_helicase mDEAH6
Gene_source:MGI:1306823



Transcript annotation


Transcript_name:AK220485
Distance:0
Num_trans:217207
All_trans:MGI:1306823



TATA-Box annotation


Distance to TSS:37
Nearest PromoterID:NM_144831
Entrez ID:217207
Nearest Unigene:Mm.28186
Nearest Refseq:NM_144831
Nearest Ensembl:ENSMUSG00000034931
Gene Name:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene Alias:Ddx8|mDEAH6|mKIAA4096
Gene Description:DEAH (Asp-Glu-Ala-His) box polypeptide 8
Gene Type:protein-coding
CpG%:0.085
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):