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Difference between revisions of "TSS:Mm 99582.1"

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Line 3: Line 3:
 
|Mtapt=
 
|Mtapt=
 
|Tau=
 
|Tau=
|all_trans=ENSMUST00000132977.7:-2 ENSMUST00000146353.1:2 ENSMUST00000132245.7:4 ENSMUST00000100347.10:7 U12914:-23 U12915:-23 U12916:-23 ENSMUST00000106993.9:-60 BC014748:-77 ENSMUST00000145227.7:-91 AK147636:-95 ENSMUST00000138384.7:-96 AK038797:-96 AK078167:-112 NM_001285455:-139 NM_001285454:-139 NM_001285456:-139 NM_010838:-139 NM_001038609:-139 M18775:-139 M18776:-139 ENSMUST00000106992.9:-185
+
|all_trans=MGI:97180
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 25: Line 25:
 
|nearest_refseq=NM_010838
 
|nearest_refseq=NM_010838
 
|nearest_unigene=Mm.1287
 
|nearest_unigene=Mm.1287
|num_trans=22
+
|num_trans=17762
 
|species=mouse
 
|species=mouse
 
|start=104231574
 
|start=104231574

Latest revision as of 19:29, 28 July 2021

Basic information about the TSS


TSS ID:mm_99582.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104231574
End:104231577
Strand:+
TSS Score:1
Start of the center position in the TSS region:104231575
End of the center position in the TSS region:104231576



Gene and protein annotation


Transcript_name:ENSMUST00000132977.7
Distance:-2
GeneID:17762
HGNC/MGI_ID:MGI:97180
UniProt_ID:B1AQW5
Gene_name:microtubule-associated protein tau
Gene_symbol:Mapt
Gene_synonyms:Mtapt Tau
Gene_source:MGI:97180



Transcript annotation


Transcript_name:ENSMUST00000132977.7
Distance:-2
Num_trans:17762
All_trans:MGI:97180



TATA-Box annotation


Distance to TSS:140
Nearest PromoterID:NM_001285456
Entrez ID:17762
Nearest Unigene:Mm.1287
Nearest Refseq:NM_010838
Nearest Ensembl:ENSMUSG00000018411
Gene Name:microtubule-associated protein tau
Gene Alias:AI413597|AW045860|Mtapt|Tau
Gene Description:microtubule-associated protein tau
Gene Type:protein-coding
CpG%:0.08
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):