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Difference between revisions of "TSS:Mm 99622.1"

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Line 2: Line 2:
 
|GP3A=
 
|GP3A=
 
|INGRB3=
 
|INGRB3=
|all_trans=ENSMUST00000127140.2:-5 AK156518:-7 LF230981:201 MA466558:201 LF230980:-327 MA466557:-327 AK198913:497
+
|all_trans=MGI:96612
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 24: Line 24:
 
|nearest_refseq=NM_016780
 
|nearest_refseq=NM_016780
 
|nearest_unigene=Mm.87150
 
|nearest_unigene=Mm.87150
|num_trans=7
+
|num_trans=16416
 
|species=mouse
 
|species=mouse
 
|start=104637393
 
|start=104637393

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99622.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104637393
End:104637402
Strand:+
TSS Score:1
Start of the center position in the TSS region:104637397
End of the center position in the TSS region:104637398



Gene and protein annotation


Transcript_name:ENSMUST00000127140.2
Distance:-5
GeneID:16416
HGNC/MGI_ID:MGI:96612
UniProt_ID:
Gene_name:integrin beta 3
Gene_symbol:Itgb3
Gene_synonyms:CD61 platelet_glycoprotein_IIIa__(GP3A)
Gene_source:MGI:96612



Transcript annotation


Transcript_name:ENSMUST00000127140.2
Distance:-5
Num_trans:16416
All_trans:MGI:96612



TATA-Box annotation


Distance to TSS:29398
Nearest PromoterID:NM_016780
Entrez ID:16416
Nearest Unigene:Mm.87150
Nearest Refseq:NM_016780
Nearest Ensembl:ENSMUSG00000020689
Gene Name:integrin beta 3
Gene Alias:CD61|GP3A|INGRB3
Gene Description:integrin beta 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):