Personal tools

Difference between revisions of "TSS:Mm 99705.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|AI413966=
 
|AI413966=
|all_trans=ENSMUST00000238639.1:-101 AK131734:-254
+
|all_trans=MGI:3642918
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 23: Line 23:
 
|nearest_refseq=NM_172397
 
|nearest_refseq=NM_172397
 
|nearest_unigene=Mm.21687
 
|nearest_unigene=Mm.21687
|num_trans=2
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=106160293
 
|start=106160293

Latest revision as of 19:32, 28 July 2021

Basic information about the TSS


TSS ID:mm_99705.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:106160293
End:106160319
Strand:+
TSS Score:1
Start of the center position in the TSS region:106160306
End of the center position in the TSS region:106160307



Gene and protein annotation


Transcript_name:ENSMUST00000238639.1
Distance:-101
GeneID:
HGNC/MGI_ID:MGI:3642918
UniProt_ID:
Gene_name:predicted gene 10840
Gene_symbol:Gm10840
Gene_synonyms:
Gene_source:MGI:3642918



Transcript annotation


Transcript_name:ENSMUST00000238639.1
Distance:-101
Num_trans:
All_trans:MGI:3642918



TATA-Box annotation


Distance to TSS:-130
Nearest PromoterID:NM_172397
Entrez ID:67803
Nearest Unigene:Mm.21687
Nearest Refseq:NM_172397
Nearest Ensembl:ENSMUSG00000040699
Gene Name:predicted gene 10840
Gene Alias:0610025L06Rik|AI413966
Gene Description:LIM domain containing 2
Gene Type:protein-coding
CpG%:0.125
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):