Difference between revisions of "TSS:Mm 99778.1"
From referenceTSS
| Line 10: | Line 10: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=135227 | |distance_to_tss=135227 | ||
|end=107335500 | |end=107335500 | ||
| Line 35: | Line 35: | ||
|start_of_center_position=107335492 | |start_of_center_position=107335492 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99778.1 | |tss_id=mm_99778.1 | ||
Latest revision as of 19:33, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107335492 |
|---|---|
| End of the center position in the TSS region: | 107335493 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 2 |
| All_trans: | NR_166848:424 NR_166849:424 |
TATA-Box annotation
| Distance to TSS: | 135227 |
|---|---|
| Nearest PromoterID: | NM_001359616 |
| Entrez ID: | 71795 |
| Nearest Unigene: | Mm.397413 |
| Nearest Refseq: | NM_145823 |
| Nearest Ensembl: | ENSMUSG00000040430 |
| Gene Name: | predicted gene 11716 |
| Gene Alias: | 1110020B03Rik|5830436L09Rik|AI662802|AI851387|C330017I21Rik|Dnr411|RDGBB|RDGBB1|mrdgBbeta|rdgB-beta |
| Gene Description: | phosphatidylinositol transfer protein, cytoplasmic 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
