Difference between revisions of "TSS:Mm 99799.1"
From referenceTSS
| Line 4: | Line 4: | ||
|AI851979= | |AI851979= | ||
|DRHC= | |DRHC= | ||
| − | |all_trans= | + | |all_trans=MGI:1925705 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_198298 | |nearest_refseq=NM_198298 | ||
|nearest_unigene=Mm.272047 | |nearest_unigene=Mm.272047 | ||
| − | |num_trans= | + | |num_trans=78455 |
|species=mouse | |species=mouse | ||
|start=107547925 | |start=107547925 | ||
| Line 32: | Line 32: | ||
|strand=+ | |strand=+ | ||
|tata_box=-43(CACTTTAAAGGC,-,0.00) | |tata_box=-43(CACTTTAAAGGC,-,0.00) | ||
| − | |transcript_name=ENSMUST00000141730.7 ENSMUST00000100305.7 | + | |transcript_name=ENSMUST00000141730.7 ENSMUST00000100305.7 AB093209 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99799.1 | |tss_id=mm_99799.1 | ||
Latest revision as of 19:34, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107547942 |
|---|---|
| End of the center position in the TSS region: | 107547943 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000141730.7 ENSMUST00000100305.7 AB093209 |
|---|---|
| Distance: | 0 |
| Num_trans: | 78455 |
| All_trans: | MGI:1925705 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_001368755 |
| Entrez ID: | 78455 |
| Nearest Unigene: | Mm.272047 |
| Nearest Refseq: | NM_198298 |
| Nearest Ensembl: | ENSMUSG00000020721 |
| Gene Name: | helicase with zinc finger domain |
| Gene Alias: | 3110078M01Rik|9430093I07Rik|9630002H22Rik|AI851979|DRHC |
| Gene Description: | helicase with zinc finger domain |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -43(CACTTTAAAGGC,-,0.00) |
