Personal tools

Difference between revisions of "TSS:Mm 99878.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|ESTM12=
 
|ESTM12=
 
|X83328=
 
|X83328=
|all_trans=ENSMUST00000092500.10:0 NM_025275:0 ENSMUST00000020929.16:24 AK077195:24 ENSMUST00000125108.1:30 AK143908:30 AK004062:35 AK075748:54 ENSMUST00000238825.1:268 NM_001252193:268 ENSMUST00000103061.2:274 BC025087:274
+
|all_trans=MGI:104837
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 24: Line 24:
 
|nearest_refseq=NM_025275
 
|nearest_refseq=NM_025275
 
|nearest_unigene=Mm.211850
 
|nearest_unigene=Mm.211850
|num_trans=12
+
|num_trans=13929
 
|species=mouse
 
|species=mouse
 
|start=109425940
 
|start=109425940
 
|start_of_center_position=109425946
 
|start_of_center_position=109425946
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000092500.10 NM_025275
+
|transcript_name=ENSMUST00000092500.10
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99878.1
 
|tss_id=mm_99878.1

Latest revision as of 19:35, 28 July 2021

Basic information about the TSS


TSS ID:mm_99878.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:109425940
End:109425952
Strand:+
TSS Score:1
Start of the center position in the TSS region:109425946
End of the center position in the TSS region:109425947



Gene and protein annotation


Transcript_name:ENSMUST00000092500.10
Distance:0
GeneID:13929
HGNC/MGI_ID:MGI:104837
UniProt_ID:B1AT59 Q400C8
Gene_name:archaelysin family metallopeptidase 2
Gene_symbol:Amz2
Gene_synonyms:ESTM12
Gene_source:MGI:104837



Transcript annotation


Transcript_name:ENSMUST00000092500.10
Distance:0
Num_trans:13929
All_trans:MGI:104837



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_025275
Entrez ID:13929
Nearest Unigene:Mm.211850
Nearest Refseq:NM_025275
Nearest Ensembl:ENSMUSG00000020610
Gene Name:archaelysin family metallopeptidase 2
Gene Alias:AA408420|ESTM12|X83328
Gene Description:archaelysin family metallopeptidase 2
Gene Type:protein-coding
CpG%:0.09
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):