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Difference between revisions of "TSS:Mm 999.1"

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Line 11: Line 11:
 
|I-FLICE=
 
|I-FLICE=
 
|MRIT=
 
|MRIT=
|all_trans=BC085105:106 ENSMUST00000069333.7:-130 BC029223:-130 ENSMUST00000123553.1:-145 AK161220:-145 ENSMUST00000114309.7:-153 AK143812:-153 NR_149255:-161 NM_009805:-161 NM_207653:-161 NM_001355056:-161 ENSMUST00000189858.1:429 AK053567:429
+
|all_trans=MGI:1336166
 
|c-Flip=
 
|c-Flip=
 
|chr=chr1
 
|chr=chr1
Line 34: Line 34:
 
|nearest_refseq=NM_009805
 
|nearest_refseq=NM_009805
 
|nearest_unigene=Mm.336848
 
|nearest_unigene=Mm.336848
|num_trans=13
+
|num_trans=12633
 
|species=mouse
 
|species=mouse
 
|start=58713446
 
|start=58713446

Latest revision as of 19:36, 28 July 2021

Basic information about the TSS


TSS ID:mm_999.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:58713446
End:58713457
Strand:+
TSS Score:1
Start of the center position in the TSS region:58713451
End of the center position in the TSS region:58713452



Gene and protein annotation


Transcript_name:BC085105
Distance:106
GeneID:12633
HGNC/MGI_ID:MGI:1336166
UniProt_ID:
Gene_name:CASP8 and FADD-like apoptosis regulator
Gene_symbol:Cflar
Gene_synonyms:2310024N18Rik A430105C05Rik Cash Casper Flip c-Flip
Gene_source:MGI:1336166



Transcript annotation


Transcript_name:BC085105
Distance:106
Num_trans:12633
All_trans:MGI:1336166



TATA-Box annotation


Distance to TSS:166
Nearest PromoterID:NM_009805
Entrez ID:12633
Nearest Unigene:Mm.336848
Nearest Refseq:NM_009805
Nearest Ensembl:ENSMUSG00000026031
Gene Name:CASP8 and FADD-like apoptosis regulator
Gene Alias:2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip
Gene Description:CASP8 and FADD-like apoptosis regulator
Gene Type:protein-coding
CpG%:0.065
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):