Personal tools

Difference between revisions of "TSS:Mm 99925.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|AI132396=
 
|AI132396=
 
|Kir5.1=
 
|Kir5.1=
|all_trans=ENSMUST00000125692.1:0 BC033442:4 ENSMUST00000180023.7:-24 ENSMUST00000106636.7:-24 NM_001252207:-24 NM_010604:-24 AK078905:-24 AK128942:-24
+
|all_trans=MGI:1314842
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 24: Line 24:
 
|nearest_refseq=NM_010604
 
|nearest_refseq=NM_010604
 
|nearest_unigene=Mm.30176
 
|nearest_unigene=Mm.30176
|num_trans=8
+
|num_trans=16517
 
|species=mouse
 
|species=mouse
 
|start=110968056
 
|start=110968056

Latest revision as of 19:36, 28 July 2021

Basic information about the TSS


TSS ID:mm_99925.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:110968056
End:110968070
Strand:+
TSS Score:1
Start of the center position in the TSS region:110968063
End of the center position in the TSS region:110968064



Gene and protein annotation


Transcript_name:ENSMUST00000125692.1
Distance:0
GeneID:16517
HGNC/MGI_ID:MGI:1314842
UniProt_ID:A2A5W8
Gene_name:potassium inwardly-rectifying channel, subfamily J, member 16
Gene_symbol:Kcnj16
Gene_synonyms:6430410F18Rik Kir5.1
Gene_source:MGI:1314842



Transcript annotation


Transcript_name:ENSMUST00000125692.1
Distance:0
Num_trans:16517
All_trans:MGI:1314842



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NM_001252207
Entrez ID:16517
Nearest Unigene:Mm.30176
Nearest Refseq:NM_010604
Nearest Ensembl:ENSMUSG00000051497
Gene Name:potassium inwardly-rectifying channel, subfamily J, member 16
Gene Alias:6430410F18Rik|AI132396|Kir5.1
Gene Description:potassium inwardly-rectifying channel, subfamily J, member 16
Gene Type:protein-coding
CpG%:0.015
GC%:0.383085
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):