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Difference between revisions of "TSS:Mm 9994.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000194953.1:249 AK138854:249 ENSMUST00000067976.8:-449 NM_144880:-449 AK145397:-449 BC059026:-449
+
|all_trans=MGI:2388479
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.185
 
|cpg_percent=0.185
Line 22: Line 22:
 
|nearest_refseq=NM_144880
 
|nearest_refseq=NM_144880
 
|nearest_unigene=Mm.205569
 
|nearest_unigene=Mm.205569
|num_trans=6
+
|num_trans=226849
 
|species=mouse
 
|species=mouse
 
|start=191396567
 
|start=191396567

Latest revision as of 19:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_9994.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:191396567
End:191396592
Strand:-
TSS Score:1
Start of the center position in the TSS region:191396579
End of the center position in the TSS region:191396580



Gene and protein annotation


Transcript_name:ENSMUST00000194953.1 AK138854
Distance:249
GeneID:226849
HGNC/MGI_ID:MGI:2388479
UniProt_ID:
Gene_name:protein phosphatase 2, regulatory subunit B', alpha
Gene_symbol:Ppp2r5a
Gene_synonyms:
Gene_source:MGI:2388479



Transcript annotation


Transcript_name:ENSMUST00000194953.1 AK138854
Distance:249
Num_trans:226849
All_trans:MGI:2388479



TATA-Box annotation


Distance to TSS:461
Nearest PromoterID:NM_144880
Entrez ID:226849
Nearest Unigene:Mm.205569
Nearest Refseq:NM_144880
Nearest Ensembl:ENSMUSG00000026626
Gene Name:protein phosphatase 2, regulatory subunit B', alpha
Gene Alias:PR61alpha
Gene Description:protein phosphatase 2, regulatory subunit B', alpha
Gene Type:protein-coding
CpG%:0.185
GC%:0.845771
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):